Software
- IMARIS Scientific 3D/4D Real time Interactive Data Visualization software from Oxford Instruments which includes, data visualization, analysis, segmentation and interpretation of 3D and 4D microscopy datasets.
- Available packages: Essentials; Exploration.
- 4 licences:
- ENTU - microscopy room
- ENTU - laboratory 224, contact Hana Sehadova or Ivo Šauman
- ENTU - laboratory 225, contact Hana Sehadova or Ivo Šauman
- JU - building B, ground floor, contact Alex Bruce
- cellSens Dimension 3D CI Deconvolution package is a powerful deconvolution implementation for all kinds of fluorescence microscopy inncluding widefield and confocal.
- Olympus FLUOVIEW Viewer software. Free viewer is available via Olympus website.
Two full licenses of FLUOVIEW (including 3DViewer) are available. Who is interested to loan it, please, contact Hana Sehadova.
- ImageJ/Fiji - free very powerful Java image processing and analysis software (Fiji = Fiji Is Just ImageJ) (Fiji HomePage, User Guide).
- napari
- QuPath
- Helicon Focus